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Package indexes


a b c d e f g h i l m n o p q r s t u v w _
a
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Variable $angle
pictures::$angle in tools.php
Variable $array
html::$array in tools.php
Variable $ArrDirMorph
outline::$ArrDirMorph in inc.outline.php
Variable $ArrDirTo
outline::$ArrDirTo in inc.outline.php
Variable $ArrOutline
outline::$ArrOutline in inc.outline.php
Variable $ArrPosCurrent
outline::$ArrPosCurrent in inc.outline.php
Variable $ArrPosGoTo
outline::$ArrPosGoTo in inc.outline.php
Global $autoSuggestion
$autoSuggestion in update.php
AJAX autoSuggestion
Method arraysToXY_user
mathuser::arraysToXY_user() in inc.outline.php
Method ave_user
mathuser::ave_user() in inc.outline.php
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Variable $background_color
c
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Global $config
$config in config.php
Configurations
Global $config['BaseUrl']
$config['BaseUrl'] in config.php
Base URL of the key
Global $config['colornames']
$config['colornames'] in config.php
Colors' declaration for {color name}
Global $config['database']
$config['database'] in config.php
Database name
Global $config['dbpassword']
$config['dbpassword'] in config.php
MySQL password for the database
Global $config['dbserver']
$config['dbserver'] in config.php
Server setting (host name)
Global $config['dbuser']
$config['dbuser'] in config.php
MySQL user for the database
Global $config['debug']
$config['debug'] in config.php
Some debug information (for developers)
Global $config['dirSpec']
$config['dirSpec'] in config.php
Directory of taxa
Global $config['fontpath']
$config['fontpath'] in config.php
Font for reference in pictures
Global $config['img_max_filesize']
Allowed (maximal) file size in kB
Global $config['img_max_size']
Allowed (maximal) width or height of images
Global $config['img_text_angle']
Default angle in transparency text images
Global $config['img_types']
$config['img_types'] in config.php
Allowed mime-types of images
Global $config['languages']
$config['languages'] in config.php
Language characters (eg. for menu in popup.php)
Global $config['languages']['default']
Default language characters (eg. for menu in popup.php)
Global $config['languages']['eu']
Europe language characters (eg. for menu in popup.php)
Global $config['languages']['keys']
Language characters keys (eg. for menu in popup.php)
Global $config['languages']['ru']
Russian language characters (eg. for menu in popup.php)
Global $config['languages']['sy']
Symbol characters (eg. for menu in popup.php)
Global $config['max_comment_length']
n-characters of comments
Global $config['popup']
$config['popup'] in config.php
Settings for popup window with text area (editing texts)
Global $config['ServerKeyDir']
Key directory of the program
Global $config['ServerRootDir']
Server root directory for the key
Variable $content
fileWriteDelete::$content in filemanage.php
Global $content
$content in popup.php
for content
Variable $contenttype
html::$contenttype in tools.php
Global $currentServerPath
$currentServerPath in update.php
Extract current server path relatively
Function calc_user
calc_user() in outline.php
For array_walk()
Method center_user
mathuser::center_user() in inc.outline.php
Method chainToXY
mathuser::chainToXY() in inc.outline.php
Method close
explicit close
Method cumsum_user
mathuser::cumsum_user() in inc.outline.php
Page check.php
check.php in check.php
Page chirokey.php
chirokey.php in chirokey.php
Page compare.php
compare.php in compare.php
Page config.php
config.php in config.php
d
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Variable $dbtime
Variable $directory
fileWriteDelete::$directory in filemanage.php
Directory to read
Variable $directory_name
Variable $doOptionGroup
Variable $doReturn
Class db_mysql
db_mysql in sql.php
Classe for communicate with the database
Method deleteFile
Deletes an image file.
Method difference
mathuser::difference() in inc.outline.php
e
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Variable $error_message
Error messages
Variable $error_no
fileWriteDelete::$error_no in filemanage.php
Error number
Method easycheck_empty
check saved tokens with actual ones
Method emphase
html::emphase() in tools.php
Emphase genera, references ...
Method error
Returns errors
Method errors
fileWriteDelete::errors() in filemanage.php
Some error messages
Method errors
pictures::errors() in tools.php
Method escape
Inserts a \ before ', " etc.
Method execute
Execute a SQL command no *results* returned
Page execute.php
execute.php in execute.php
f
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Variable $file_binary
Variable $file_extension
File's extension/data
Function FilesRead
FilesRead() in functions.php
Read files in a directory
Class fileWriteDelete
fileWriteDelete in filemanage.php
Classes used for handling files (writing/reading)
Class formreload
formreload in tools.php
Prevent dublicate entries in database by a reload
Method Fourier
mathuser::Fourier() in inc.outline.php
Page filemanage.php
filemanage.php in filemanage.php
Page functions.php
functions.php in functions.php
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Method getharmonics
mathuser::getharmonics() in inc.outline.php
Method getMysqli
Returns $mysqli
Method get_formtoken
generates a random uniq id
Method goToPixel
outline::goToPixel() in inc.outline.php
h
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Global $headerinput
$headerinput in popup.php
for header
Method harmonicsToXY
mathuser::harmonicsToXY() in inc.outline.php
Class html
html in tools.php
for dealing with HTML (formatting)
i
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Global $inputelement
$inputelement in popup.php
form elements
Variable $isHref
html::$isHref in tools.php
Method imagecreatefromfile
Method imageDrawOutline
outline::imageDrawOutline() in inc.outline.php
Method imageOutline
outline::imageOutline() in inc.outline.php
Page index.php
index.php in index.php
Function info_end
info_end() in tools.php
html footer
Function info_level
info_level() in tools.php
write taxonomic levels
Function info_start
info_start() in tools.php
Method insertId
Get inserted ID after INSERT
Page install.php
install.php in install.php
Page image.php
image.php in image.php
Page inc.outline.php
inc.outline.php in inc.outline.php
l
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Function lb2string
lb2string() in functions.php
replace linebreaks to
Method loadedImageFromFile
m
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Global $menu
$menu in popup.php
for menus
Global $message
$message in popup.php
some messages
Variable $mysqli
Global $MysqlInsert
$MysqlInsert in config.php
MySQL's inserts
Global $MysqlSelect
$MysqlSelect in config.php
MySQL Queries
Global $MysqlSelect['GeneraSynoCounted']
Query table names_synonyms gernera + #species
Global $MysqlSelect['GeneraToIdAll']
Query table names_genera gernera + ID
Global $MysqlSelect['GeneraValidId']
Query valid gernera + subfamily
Global $MysqlSelect['GenusCharacters']
Fetch characters of Genus sp.
Global $MysqlSelect['SpecimenCharacters']
Fetch for select list for specimens
Global $MysqlSelect['SpecimenCharactersSingle']
Fetch characters for a single specimen
Global $MysqlSelect['Synonyms']
MySQL queries to compose synonyms
Global $MysqlSelect['TaxaExistInCharacters']
Show data in table characters
Global $MysqlUpdate
$MysqlUpdate in config.php
MySQL's updates
Page morphology.php
morphology.php in morphology.php
Class mathuser
mathuser in inc.outline.php
Classes to calculate normalized Fourier outlines
Method menubar
html::menubar() in tools.php
menu bar for popup.php
n
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Variable $name
html::$name in tools.php
Page navi.php
navi.php in navi.php
o
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Global $onsubmit
$onsubmit in popup.php
form action
Page openlayerMaps.php
openlayerMaps.php in openlayerMaps.php
Page outline.php
outline.php in outline.php
Class outline
outline in inc.outline.php
Classes to calculate normalized Fourier outlines
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Global $page
$page in pages.php
HTML Page settings
Global $page['first']
$page['first'] in pages.php
"Home" page
Global $page['foot']
$page['foot'] in pages.php
HTML foot
Global $page['footbefore']
$page['footbefore'] in pages.php
Moving javascript menu on the right side
Global $page['genus_searches']
Searching for genera names
Global $page['head']
$page['head'] in pages.php
HTML page head
Page popup.php
popup.php in popup.php
Method pattern2tag
html::pattern2tag() in tools.php
create HTML from wikipedia like syntax
Method pencil
html::pencil() in tools.php
small icon pencil
Class pictures
pictures in tools.php
Class for text images
Method polyXYdistance
mathuser::polyXYdistance() in inc.outline.php
Function print_pre
print_pre() in outline.php
Print text as <pre>...</pre>
Function putToArray
putToArray() in functions.php
Put things into an array
Page pages.php
pages.php in pages.php
q
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Page queryDB.php
queryDB.php in queryDB.php
Method queryArray
Execute SELECT query
Method queryObjectArray
Execute SELECT query
Method querySingleItem
Return a single item
r
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Variable $rowcounter
Page references.php
references.php in references.php
Function replaceHTMLcode
replaceHTMLcode() in functions.php
Replace difficult code characters
Method resetStatistics
Set statistics to zero
s
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Variable $searchtext
html::$searchtext in tools.php
Variable $showerror
Variable $showsql
Variable $source
fileWriteDelete::$source in filemanage.php
Variable $sqlcounter
Variable $starttime
Variable $strFileInput
Uploded file
Variable $strFilename
Destination to write the file
Variable $strReferenceName
Page search.php
search.php in search.php
Page self.php
self.php in self.php
Page synonyms.php
synonyms.php in synonyms.php
Function sci
sci() in outline.php
Scientific numbers
Method searchStringOnline
Searches a string in online databases
Method select
html::select() in tools.php
creates select options
Method showStatistics
Print statistics
Method sql_string
Escapes strings for save
Page sql.php
sql.php in sql.php
Page session.inc.php
session.inc.php in session.inc.php
Method sum_user
mathuser::sum_user() in inc.outline.php
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Global $templates
$templates in templates.php
Templates
Global $templates['explained:LOI']
Explained variable LOI: Loss On Ignition
Global $templates['explained:N2:HillsDiversity']
Explained variable N2: Hill“s (1973) diversity measure
Global $templates['explained:N2:transferModels']
Explained variable N2: effective number of occurrence
Global $templates['HOF:noDistribution']
Statistical HOF model curve (model 1: no specific distribution)
Global $templates['HOF:sigmoidalNotUpperLeft']
Statistical HOF model curve (model 3: left sigmoidal, reaching NOT the upper bound)
Global $templates['HOF:sigmoidalNotUpperRight']
Statistical HOF model curve (model 3: right sigmoidal, reaching NOT the upper bound)
Global $templates['HOF:sigmoidalUpperLeft']
Statistical HOF model curve (model 2: left sigmoidal, reaching upper bound)
Global $templates['HOF:sigmoidalUpperRight']
Statistical HOF model curve (model 2: right sigmoidal, reaching upper bound)
Global $templates['HOF:skewedLeft']
Statistical HOF model curve (model 5: left skewed)
Global $templates['HOF:skewedRight']
Statistical HOF model curve (model 5: right skewed)
Global $templates['HOF:unimodal']
Statistical HOF model curve (model 4: unimodal)
Global $templates['internal:hiddenMap']
Internal template: hidden map
Global $templates['questions:open']
Open questions...
Global $templates['Reference:Error']
Error for reference
Variable $text
html::$text in tools.php
Variable $text
pictures::$text in tools.php
Variable $tokenname
name of hidden element <input>
Page tools.php
tools.php in tools.php
Page templates.php
templates.php in templates.php
Page thumb.php
thumb.php in thumb.php
Function tabprint
tabprint() in functions.php
Print a pretty table to save
Method tag2pattern
html::tag2pattern() in tools.php
remove some HTML syntax to wikipedia like ones
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Page update.php
update.php in update.php
Page upload.php
upload.php in upload.php
Function user_htmlentities
user_htmlentities() in tools.php
for array_walk()
Function user_sortwords
user_sortwords() in functions.php
Sort comma lists by patternSplit or arrays to strings
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Method validateImage
Test whether it is an image
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Method write
fileWriteDelete::write() in filemanage.php
Writes a file_r.jpeg or file_r.png
Method writeDirectory
Create a directory with full rights (mode=0777)
Method writeReference
Writes a reference into the image file.
Method write_text_picture
write text in table's headings rotated
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Global $_SESSION['references']
$_SESSION['references'] in chirokey.php
Collecting all references in session variable
Method __construct
Prepare MySQL database connenction
Method __construct
Test directory if it can be opend or is writable
Method __destruct
close database connenction
Method __destruct
Close directory reading
a b c d e f g h i l m n o p q r s t u v w _